BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB024G08LP1|AL428275
(848 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig526 1617 0.0
>3x_Contig526
Length = 2622
Score = 1617 bits (808), Expect = 0.0
Identities = 832/848 (98%)
Strand = Plus / Plus
Query: 1 gatcatattttagtatctggtcatgatggtggtacaggtgcatccagatggaccggtatc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1386 gatcatattttagtatctggtcatgatggtggtacaggtgcatccagatggaccggtatc 1445
Query: 61 aagtatgctggtttaccatgggaacttggtttagctgaaacacaccaaacattagttttg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1446 aagtatgctggtttaccatgggaacttggtttagctgaaacacaccaaacattagttttg 1505
Query: 121 aatgatttgagaggaaacgtcgttgttcaaactgatggtcaattgagaacaggattygat 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 1506 aatgatttgagaggaaacgtcgttgttcaaactgatggtcaattgagaacaggattcgat 1565
Query: 181 attgctgttgcaattttattaggtgccgaatctttcactttggcgaccgttcctttgatt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1566 attgctgttgcaattttattaggtgccgaatctttcactttggcgaccgttcctttgatt 1625
Query: 241 gctatgggctgtattatgttgagaaaatgtcatttgaacgcatgttcagttggtattgcc 300
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 1626 gctatgggctgtattatgttgagaaaatgtcatttgaacgcatgtgcagttggtattgcc 1685
Query: 301 actcaagaccccgttttgagagaaaaattcaaaggtcaacctgaacatgtcatcaacttc 360
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 1686 actcaagaccccgttttgagagacaaattcaaaggtcaacctgaacatgtcatcaacttc 1745
Query: 361 ttctattatttgatccaagatttgagaaggataatggcaaagttgggcttcagaactgtt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1746 ttctattatttgatccaagatttgagaaggataatggcaaagttgggcttcagaactgtt 1805
Query: 421 gacgaaatggtgggacactctgagaagttgagaaaaagagacaacgtcaagaccaaagcg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1806 gacgaaatggtgggacactctgagaagttgagaaaaagagacaacgtcaagaccaaagcg 1865
Query: 481 ttgaatattgacttatctccaatcttgactcctgcccacttgatcagaccaggagttgca 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1866 ttgaatattgacttatctccaatcttgactcctgcccacttgatcagaccaggagttgca 1925
Query: 541 acaaagtttaccaaaaagcagggtcacaagttacacactagactcgacaatwagttaatc 600
|||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||
Sbjct: 1926 acaaagtttaccaaaaagcaggatcacaagttacacactagactcgacaataagttaatc 1985
Query: 601 gacgaagctgaaattactctagataagggkttgccagttaccattkatgccaacatcatc 660
||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||
Sbjct: 1986 gacgaagctgaaattactctagataagggtttgccagttaccattgatgccaacatcatc 2045
Query: 661 aacactkatcgtgctttggggkcaacactgtyatacagagtctctwaaaggttcggtgaa 720
|||||| |||||||||||||| ||||||||| ||||||||||||| ||||||||||||||
Sbjct: 2046 aacactgatcgtgctttggggtcaacactgtcatacagagtctctaaaaggttcggtgaa 2105
Query: 721 aatggtctacctcaggatacggtggtggttwatatatytkgttcagctggtcagtcattc 780
|||||||||||||||||||||||||||||| |||||| | ||||||||||||||||||||
Sbjct: 2106 aatggtctacctcaggatacggtggtggttaatatatctggttcagctggtcagtcattc 2165
Query: 781 ggtgcattcctaactgcyggtttgaccttcattttagatggtgatgccaacgattattta 840
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 2166 ggtgcattcctaactgctggtttgaccttcattttagatggtgatgccaacgattatgta 2225
Query: 841 ggaaaggg 848
||||||||
Sbjct: 2226 ggaaaggg 2233
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.39 0.713 1.32
Gapped
Lambda K H
1.39 0.713 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5623
Number of Sequences: 1807
Number of extensions: 5623
Number of successful extensions: 47
Number of sequences better than 1.0e-20: 1
length of query: 848
length of database: 10,358,551
effective HSP length: 16
effective length of query: 832
effective length of database: 10,329,639
effective search space: 8594259648
effective search space used: 8594259648
T: 0
A: 40
X1: 5 (10.0 bits)
X2: 14 (28.0 bits)
S1: 12 (24.5 bits)
S2: 50 (100.5 bits)